BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H02LP1|AL430296
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 1187 0.0
>3x_Contig1538
Length = 9120
Score = 1187 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 1 acattggtgaccacccaacactatctcgaaaaacacaaaaatgcaaatgaccttcaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 acattggtgaccacccaacactatctcgaaaaacacaaaaatgcaaatgaccttcaatcg 270
Query: 61 ttaatatattaccggcattttacttatggttcgtcttccgcagtatttgtgcctttgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttaatatattaccggcattttacttatggttcgtcttccgcagtatttgtgcctttgtat 330
Query: 121 gaatggcacggcaatttggatgagacatcaaatacgtataaagtgatcatatattaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaatggcacggcaatttggatgagacatcaaatacgtataaagtgatcatatattaccat 390
Query: 181 aagtaatcaaaacaatgtactgcacataatcaaacataaacacagacgcgatgagatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aagtaatcaaaacaatgtactgcacataatcaaacataaacacagacgcgatgagatgca 450
Query: 241 actatacaaaaaacgctgaaaccactgctaaacagtagcaaaacatgtctgatgatcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 actatacaaaaaacgctgaaaccactgctaaacagtagcaaaacatgtctgatgatcagg 510
Query: 301 gaacagatctgaatctaagtgagttagtcggaaacatactcgctgcctccgatgataata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaacagatctgaatctaagtgagttagtcggaaacatactcgctgcctccgatgataata 570
Query: 361 ttccgtcgttagaagacacacaaaggcatgatgagcatcaaaatgacaacgatcatattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttccgtcgttagaagacacacaaaggcatgatgagcatcaaaatgacaacgatcatattg 630
Query: 421 gggaagatgatatcttgccagatttgctacctatatctcaaatacctgatgatgagcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gggaagatgatatcttgccagatttgctacctatatctcaaatacctgatgatgagcatg 690
Query: 481 ctcaagaccattctctagcttcgatggtgtcgcaggctattaatactatgaataacgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ctcaagaccattctctagcttcgatggtgtcgcaggctattaatactatgaataacgaaa 750
Query: 541 caggtgatcccactcatgtcaatgaaagtcattctgatctgcaaagcaaagaacag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 caggtgatcccactcatgtcaatgaaagtcattctgatctgcaaagcaaagaacag 806
Score = 406 bits (204), Expect = e-113
Identities = 238/248 (95%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 730 tattagaccaggtatgacgaaaaccttcggcttgctattttagactcattacaacatttg 789
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 916 tattagaccagg-atgacgaaaaccttcggcttgcttttttagactcattacaacatttg 974
Query: 790 gatcaggagaagaagccgaagaagcattctaagaaggagaagaaatccaaagaaaagaag 849
|||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 975 gatcaggagaagaagccgaagaagcattcttagaaggagaagaaatccttagtaaagaag 1034
Query: 850 aagaccagtaagaagggcgataaggagaaagaaaagtctaagaagaaagagaaaaagtcc 909
||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 1035 aagaccagtaagaagggcgataaaaaaaaagtaaagtctaagaagaaagagaaaaagtcc 1094
Query: 910 aaagaaaaaaagagctctagcaataatgatgtgctcaattttgaagatgttattaagggc 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aaagaaaaaaagagctctagcaataatgatgtgctcaattttgaagatgttattaagggc 1154
Query: 970 ttcatgga 977
||||||||
Sbjct: 1155 ttcatgga 1162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7940
Number of Sequences: 1807
Number of extensions: 7940
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)